1. 23 Nov, 2020 1 commit
    • Bentriou Mahmoud's avatar
      Change of Trajectory.values type from Matrix to Vector of Vector in · 5b7fc78f
      Bentriou Mahmoud authored
      order to replace vcat by push!.
      The benchmarks are at least equal, and better when the buffer size is
      small. However, no significative difference of performance with adequate
      buffer size.
      My opinion the gain can be seen when simulations are going to be very
      long with more complicated models than we have implemented for now.
      All tests passed.
  2. 22 Nov, 2020 2 commits
    • Bentriou Mahmoud's avatar
      Small restruction in Cosmos tests. · fadb5929
      Bentriou Mahmoud authored
      Add of set_time_bound!
      Add of a first notebook example to explain the package.
    • Bentriou Mahmoud's avatar
      Add of a function in models that creates new model objects + tests. · 2a9d3b72
      Bentriou Mahmoud authored
      Add of a major test based on Cosmos: tests/cosmos/distance_F/ER_1D.jl
      The LHA distance F of this package is tested with Cosmos.
      For several parameters in R1, R2, R3 experiments (see Bentriou,
      Ballarini, Cournede 2018), Cosmos is called to
      compute an average distance. Then we collect the number of simulations
      and the estimated value computed by Cosmos.
      We compute an average distance by the package methods with the same
      number of simulations done by Cosmos
      Then the two average distances are compared to each others with
      regard to the width of the confidence interval set in Cosmos.
      Test passed.
  3. 21 Nov, 2020 2 commits
  4. 20 Nov, 2020 2 commits
  5. 19 Nov, 2020 1 commit
  6. 18 Nov, 2020 1 commit
  7. 17 Nov, 2020 2 commits
  8. 16 Nov, 2020 2 commits
  9. 15 Nov, 2020 1 commit
    • Bentriou Mahmoud's avatar
      - Add of ER model + tests · 06dca928
      Bentriou Mahmoud authored
      - Add of benchmark scripts that compares perf wrt pygmalion.
      => As expected it is bad in terms of reading cost (because of row by row
      matrix read) but it is also not good in terms of simulation cost.
      hcat seems to perform badly, should investigate.
  10. 14 Nov, 2020 2 commits