module MarkovProcesses import Base: +, -, * import Base: copy, getfield, getindex, getproperty, lastindex import Base: setindex!, setproperty!, fill!, copyto! import StaticArrays: SVector import Distributed: @everywhere, @distributed import Distributions: Distribution, Product, Uniform, Normal export Distribution, Product, Uniform, Normal # Common types and constructors export Observations, AbstractTrajectory, Trajectory, SynchronizedTrajectory export Model, ContinuousTimeModel, SynchronizedModel, ParametricModel export LHA, StateLHA, Edge # Trajectory related methods export +, -, δ, dist_lp export get_obs_var, length_states, length_obs_var, get_state_from_time export isbounded, times, transitions export check_consistency, issteadystate, isaccepted # LHA related methods export init_state, next_state!, read_trajectory export get_index, get_value, length_var, isaccepted # Model related methods export simulate, volatile_simulate export distribute_mean_value_lha, mean_value_lha, distribute_prob_accept_lha export set_param!, set_time_bound!, set_observed_var!, observe_all! export get_param, getproperty, get_proba_model, get_observed_var export isbounded, isaccepted, check_consistency export draw_model!, draw!, fill!, prior_pdf!, prior_pdf, insupport # Utils export get_module_path, cosmos_get_values export load_model, load_automaton, load_plots # Algorithms export automaton_abc, abc_smc include("common.jl") include("trajectory.jl") include("lha.jl") include("model.jl") include("utils.jl") include("../algorithms/abc_smc.jl") end