automata and proba moels are differents. This bug was introduced after
we change the structure of automata in order to better distributed
programming.
It leads to a restructuration of automata. In fine, the structure is
more stable and consistent. It is possible it is more computationally
efficient, but for now it is not well tested.

2) Creation of functions that collects data along with a timeline
over a trajectory + unit test vectorize.

3) Very small fix in plots and abc smc.