From 7dcbab36d5daeb21dc13e5286155fcfaf5649a0a Mon Sep 17 00:00:00 2001
From: Kappes Marques Rodrigo <rodrigo.kappes@student-cs.fr>
Date: Tue, 28 Jan 2020 09:37:49 +0100
Subject: [PATCH] added orta
---
RotTable.py | 9 +++++----
1 file changed, 5 insertions(+), 4 deletions(-)
diff --git a/RotTable.py b/RotTable.py
index ae014b4..55d87b0 100644
--- a/RotTable.py
+++ b/RotTable.py
@@ -24,20 +24,20 @@ class RotTable:
"TT": [35.62, 7.2, -154, 0.06, 0.6, 0]\
}
- # get the angles in each axis (x, y, z), considering a deviation
def __init__(self):
self.rot_table = {}
for dinucleotide in RotTable.__ORIGINAL_ROT_TABLE:
self.rot_table[dinucleotide] = RotTable.__ORIGINAL_ROT_TABLE[dinucleotide][:3]
self.alea()
- # considering the errors (last 3 columns of __ORIGINAL_ROT_TABLE),
- # add random error to the "mean value" of the angles of each axis
+
def alea(self):
for dinucleotide in RotTable.__ORIGINAL_ROT_TABLE:
for i in range(2):
self.rot_table[dinucleotide][i] += numpy.random.uniform(low = -RotTable.__ORIGINAL_ROT_TABLE[dinucleotide][i+3], high= RotTable.__ORIGINAL_ROT_TABLE[dinucleotide][i+3])
+ def orta(self):
+ return self.__ORIGINAL_ROT_TABLE
###################
# WRITING METHODS #
@@ -61,4 +61,5 @@ class RotTable:
###################
table1 = RotTable()
-print(table1.rot_table["AA"])
+print(table1.orta())
+
--
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