From cf71484501b631054b71e66ddcf46b8984444715 Mon Sep 17 00:00:00 2001
From: Gauthier Roy <gauthierroy83@gmail.com>
Date: Wed, 29 Jan 2020 14:37:47 +0100
Subject: [PATCH] pull
---
individu.py | 15 +++++++--------
1 file changed, 7 insertions(+), 8 deletions(-)
diff --git a/individu.py b/individu.py
index 1d2a706..dc25ddd 100644
--- a/individu.py
+++ b/individu.py
@@ -29,13 +29,12 @@ class Individu():
last_seq = self.brin[-numb_ajout:]
traj.compute(last_seq + self.brin + fisrt_seq, self.table)
- traj_array = np.array(traj.getTraj())
+ traj_array = traj.getTraj()
list_distance = []
- begining = traj_array[0:2*numb_ajout, 0:3]
- end = traj_array[-2*numb_ajout:, 0:3]
-
+ begining = np.array(traj_array[0:2*numb_ajout])
+ end = np.array(traj_array[-2*numb_ajout:])
for i in range(numb_ajout):
nuc_coordonate_beg = begining[i]
@@ -116,10 +115,10 @@ class Individu():
# print(individu1.table.rot_table)
# individu1.mutation()
-#table = RotTable()
-#test = Individu(table)
-#test.evaluate("AAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCCAGTAAACGAAAAAACCGCCTGGGGAGGCGGTTTAGTCGAA")
-#print(test.score)
+table = RotTable()
+test = Individu(table)
+test.evaluate()
+print(test.score)
# qqun=Individu(RotTable())
--
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