Commits · c809fe7efec967783960e681b0569ee169bca24d · Bentriou Mahmoud / MarkovProcesses.jl · GitLab

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Feb 17, 2021
- Rewriting semantics for functions of a LHA, we change the signature of · b2089a2e
  Bentriou Mahmoud authored 4 years ago
  b2089a2e
- rewriting parts of core/lha · e297f287
  Bentriou Mahmoud authored 4 years ago
  
  e297f287
Feb 16, 2021
- nothing instead of [nothing] for asynchronous edges transitions is a better semantic · 29d43eec
  Bentriou Mahmoud authored 4 years ago
  
  29d43eec
- add of a new automaton for computing euclidean distances + tests · 119c1c41
  Bentriou Mahmoud authored 4 years ago
  
  119c1c41
- small fix in simulation test of repressilator · 4ba2e876
  Bentriou Mahmoud authored 4 years ago
  
  4ba2e876
Feb 07, 2021
- Several fixs: · 40cf91a4
  Bentriou Mahmoud authored 4 years ago
  40cf91a4
Feb 03, 2021
- small fix g automaton · 282b4f27
  Bentriou Mahmoud authored 4 years ago
  
  282b4f27
- small fix when x0 is absorbing for automaton G F · 4221647a
  Bentriou Mahmoud authored 4 years ago
  
  4221647a
Feb 02, 2021
- Now pictures are saved in svg. All tests passed. · a94525a5
  Bentriou Mahmoud authored 4 years ago
  
  a94525a5
Feb 01, 2021
- All automata were readapted and are in accordance with the last description of... · 8bb99324
  Bentriou Mahmoud authored 4 years ago
  8bb99324
Jan 28, 2021
- performance improvement of euclidean distance automaton · 33f82cc3
  Bentriou Mahmoud authored 4 years ago
  
  33f82cc3
Jan 27, 2021
- Small fix in tests · ec345f72
  Bentriou Mahmoud authored 4 years ago
  
  ec345f72
- Creation of automata has been change again to improve performance. Now · 886e9d98
  Bentriou Mahmoud authored 4 years ago
  886e9d98
Jan 25, 2021
- Supplementary checks on automata + small fix on unit tests · b1c40b0f
  Bentriou Mahmoud authored 4 years ago
  
  b1c40b0f
- one test sim for repressilator · b55ebba1
  Bentriou Mahmoud authored 4 years ago
  
  b55ebba1
- 1) Detection of a bug when two synchronized models with two different · 00b622f3
  Bentriou Mahmoud authored 4 years ago
  00b622f3
Jan 16, 2021
- Improvement of the distributed simulation paradigm of the package. · da3146df
  Bentriou Mahmoud authored 4 years ago
  da3146df
- now the package has a better structure for distributed simulations by better... · 9028ff5d
  Bentriou Mahmoud authored 4 years ago
  9028ff5d
Jan 13, 2021
- add of R4 in models_exps_er_2d · 412e718b
  Bentriou Mahmoud authored 4 years ago
  
  412e718b
Dec 22, 2020
- new model: square wave oscillator · 9bdf9e9d
  Bentriou Mahmoud authored 4 years ago
  
  9bdf9e9d
Dec 20, 2020
- macro network_model is a bit more tested · a9a7a453
  Bentriou Mahmoud authored 4 years ago
  
  a9a7a453
Dec 12, 2020
- test of birth-death model process with macro · e1f79988
  Bentriou Mahmoud authored 4 years ago
  
  e1f79988
Dec 10, 2020
- Replaced access of fields in models with getfield. Improvement of... · 9d52b2eb
  Bentriou Mahmoud authored 4 years ago
  9d52b2eb
- Fix in simulation of macro generated models. Small changes with variables... · 3e6718b7
  Bentriou Mahmoud authored 4 years ago
  3e6718b7
Dec 09, 2020
- Variables, parameters and transitions of models are now represented as · 8fa83b7f
  Bentriou Mahmoud authored 4 years ago
  8fa83b7f
- Change of types: String => Symbol for locations, constants, · c3d6a1f7
  Bentriou Mahmoud authored 4 years ago
  c3d6a1f7
- Some special cases with absorbing states were fixed in the construction · 667eebf5
  Bentriou Mahmoud authored 4 years ago
  667eebf5
Dec 07, 2020
- Automaton G and F works and is statistically tested with Cosmos. · 51eee9c4
  Bentriou Mahmoud authored 4 years ago
  51eee9c4
Dec 06, 2020
- Modification of print of models + renaming macro for creation of models in... · 4162776b
  Bentriou Mahmoud authored 4 years ago
  4162776b
Dec 05, 2020
- Implementation of the possibility of naming a model · e6944e0b
  Bentriou Mahmoud authored 4 years ago
  
  e6944e0b
- Modification of sir_tauleap for new simulate functions + add of · 70407040
  Bentriou Mahmoud authored 4 years ago
  70407040
- Implementation of the macro @biochemical_network. It gives an easy way · b4521042
  Bentriou Mahmoud authored 4 years ago
  b4521042
Dec 03, 2020
- Renaming of fields for more readability · 48a39408
  Bentriou Mahmoud authored 4 years ago
  
  48a39408
- set_x0! + tests · 21f736b8
  Bentriou Mahmoud authored 4 years ago
  
  21f736b8
- add tests and fix warning tests + poisson process · 9190a75c
  Bentriou Mahmoud authored 4 years ago
  
  9190a75c
Dec 01, 2020
- Test of distance G automaton passes! · f4c41acb
  Bentriou Mahmoud authored 4 years ago
  f4c41acb
Nov 30, 2020
- A major fix in simulation was done, side effect issue, an efficient · c095bee4
  Bentriou Mahmoud authored 4 years ago
  c095bee4
Nov 29, 2020
- Distributed ABC · bf35d240
  Bentriou Mahmoud authored 4 years ago
  
  bf35d240
Nov 27, 2020
- Automaton-ABC is implemented and works wells for ER 1D experiments · 67040dc5
  Bentriou Mahmoud authored 4 years ago
  67040dc5
- forgot change of run_unit · a911a325
  Bentriou Mahmoud authored 4 years ago
  
  a911a325