Commits · 9c967aab7e388ebbe017762c6ebaf4b7b0c5b119 · Bentriou Mahmoud / MarkovProcesses.jl · GitLab

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May 21, 2021
- Move of imports in abc_smc · 9c967aab
  Bentriou Mahmoud authored 4 years ago
  
  9c967aab
May 19, 2021
- Add of distributed algorithm for the reference table creation in abc model... · 715f269f
  Bentriou Mahmoud authored 4 years ago
  715f269f
May 13, 2021
- implementation of abc model choice with random forest · 97df1230
  Bentriou Mahmoud authored 4 years ago
  
  97df1230
Mar 30, 2021
- better print · a72f8e95
  Bentriou Mahmoud authored 4 years ago
  
  a72f8e95
Mar 21, 2021
- new methods trajectory_from_csv · 36713460
  Bentriou Mahmoud authored 4 years ago
  
  36713460
- small rewrite of assert print in ParametricModel · 9c7c802b
  Bentriou Mahmoud authored 4 years ago
  
  9c7c802b
Mar 08, 2021
- small change in plots · 52bdf469
  Bentriou Mahmoud authored 4 years ago
  
  52bdf469
Mar 02, 2021
- small fix in abc with reject automaton. add of more tests and benchmark · 95c83834
  Bentriou Mahmoud authored 4 years ago
  
  95c83834
Feb 28, 2021
- update of notebooks according to the new simulation methods · 66d44c7e
  Bentriou Mahmoud authored 4 years ago
  
  66d44c7e
- Add of a new feature: change_simulation_stop_criteria. It allows to · 920cd91a
  Bentriou Mahmoud authored 4 years ago
  920cd91a
- Small fix in ABC euclideau distance automaton for distributed abc. · 4c4abbfa
  Bentriou Mahmoud authored 4 years ago
  4c4abbfa
- Add of a new automaton related to ABC. · de9fbd7e
  Bentriou Mahmoud authored 4 years ago
  de9fbd7e
Feb 24, 2021
- Finally I managed to improve the performance of function access of LHA. · dc5689b5
  Bentriou Mahmoud authored 4 years ago
  dc5689b5
- Big improvement of network models performance with SVector · 99ece473
  Bentriou Mahmoud authored 4 years ago
  
  99ece473
- Go back to the best performance version of bench/pkg/sim_sync_R6.jl · c5af570e
  Bentriou Mahmoud authored 4 years ago
  
  c5af570e
- I've implemented another way of dispatching check_constraints and · 961bab06
  Bentriou Mahmoud authored 4 years ago
  961bab06
Feb 23, 2021
- I tried to optimize with multiple dispatch and types but it doesn't work. · 0ffb9f9d
  Bentriou Mahmoud authored 4 years ago
  
  0ffb9f9d
Feb 22, 2021
- add of all the benchmark performance tests for the package · 3173a3fd
  Bentriou Mahmoud authored 4 years ago
  
  3173a3fd
- The new meta paradigm was extended to all automata and models · f98cd441
  Bentriou Mahmoud authored 4 years ago
  f98cd441
Feb 21, 2021
- Fix of the segfault generated by the euclidean automaton test. · dd619a95
  Bentriou Mahmoud authored 4 years ago
  dd619a95
- forgot a bunch of files related to the last commit · e8d15bd4
  Bentriou Mahmoud authored 4 years ago
  
  e8d15bd4
- Meta code generation for next_state! and simulation of synchronized... · 43a3f23f
  Bentriou Mahmoud authored 4 years ago
  43a3f23f
Feb 20, 2021
- The package becomes more meta to reach higher performance. · 5d886fc4
  Bentriou Mahmoud authored 4 years ago
  5d886fc4
Feb 19, 2021
- Slight improvement of next_state! perforance by allocating · c809fe7e
  Bentriou Mahmoud authored 4 years ago
  c809fe7e
Feb 18, 2021
- Another rewriting of LHA methods. Improves readability and avoid an · 9cf25cea
  Bentriou Mahmoud authored 4 years ago
  9cf25cea
- small fix in constructor of ContinuousTimeModel with default g variable · 2f893aa0
  Bentriou Mahmoud authored 4 years ago
  
  2f893aa0
Feb 17, 2021
- Rewriting semantics for functions of a LHA, we change the signature of · b2089a2e
  Bentriou Mahmoud authored 4 years ago
  b2089a2e
- rewriting parts of core/lha · e297f287
  Bentriou Mahmoud authored 4 years ago
  
  e297f287
Feb 16, 2021
- small change to small improvement of performance in lha · 8c673bae
  Bentriou Mahmoud authored 4 years ago
  
  8c673bae
- nothing instead of [nothing] for asynchronous edges transitions is a better semantic · 29d43eec
  Bentriou Mahmoud authored 4 years ago
  
  29d43eec
- small fix in synchronisation · c6e0cefc
  Bentriou Mahmoud authored 4 years ago
  
  c6e0cefc
Feb 15, 2021
- changes in repressilator: transition name + degradation reactions; change in plots · dbaccafa
  Bentriou Mahmoud authored 4 years ago
  
  dbaccafa
Feb 14, 2021
- big fix of period automaton, updates of mean and var were false · f589101f
  Bentriou Mahmoud authored 4 years ago
  
  f589101f
- fix deepcopy model.jl + fix plot oscillatory trajectory + small fix period automaton · 7e6d6ee9
  Bentriou Mahmoud authored 4 years ago
  
  7e6d6ee9
Feb 12, 2021
- fix of an edge with distance for period automaton · c7e07a4d
  Bentriou Mahmoud authored 4 years ago
  
  c7e07a4d
- small change in plots · 2659a6a8
  Bentriou Mahmoud authored 4 years ago
  
  2659a6a8
Feb 09, 2021
- small rewrite of smc function · 2cc0a568
  Bentriou Mahmoud authored 4 years ago
  
  2cc0a568
Feb 08, 2021
- forgot delete a print · e364647f
  Bentriou Mahmoud authored 4 years ago
  
  e364647f
- new model intracellular viral infection + smc_chernoff · 9e57c693
  Bentriou Mahmoud authored 4 years ago
  
  9e57c693
Feb 07, 2021
- Several fixs: · 40cf91a4
  Bentriou Mahmoud authored 4 years ago
  40cf91a4